:orphan: 





.. _blq_pk_gen:



Depot + One compartment PK with BLQ
###################################

[Generated automatically as a Generation summary]

Inputs
******



Description
===========

:Name: blq_pk

:Title: Depot + One compartment PK with BLQ

:Author: J.R. Hartley

:Abstract: 

| Depot One Comp PK model, with BLQ (below level of quantification) observations.

:Keywords: tutorial; pk; advan4; dep_two_cmp; blq

:Input Script: :download:`blq_pk_gen.pyml <blq_pk_gen.pyml>`

:Diagram: 


.. thumbnail:: blq_pk_gen.pyml_output/gen/compartment_diagram.svg
    :width: 200px


True f[X] values
================

.. code-block:: pyml

    f[KA] = 0.2000
    f[CL] = 2.0000
    f[V1] = 50.0000
    f[KA_isv,CL_isv,V1_isv] = [
        [ 0.1000, 0.0200, 0.0100 ],
        [ 0.0200, 0.0300, 0.0200 ],
        [ 0.0100, 0.0200, 0.0900 ],
    ]
    f[PNOISE] = 0.1500
    f[ANOISE] = 0.0100



Outputs
*******



Generated parameter .csv files
==============================


:Fixed Effects: :download:`fx_params.csv (gen) <blq_pk_gen.pyml_output/gen/fx_params.csv>`

:Random Effects: :download:`rx_params.csv (gen) <blq_pk_gen.pyml_output/gen/rx_params.csv>`

:Model params: :download:`mx_params.csv (gen) <blq_pk_gen.pyml_output/gen/mx_params.csv>`

:State values: :download:`sx_params.csv (gen) <blq_pk_gen.pyml_output/gen/sx_params.csv>`

:Predictions: :download:`px_params.csv (gen) <blq_pk_gen.pyml_output/gen/px_params.csv>`


:Synthetic Data: :download:`synthetic_data.csv (gen) <synthetic_data.csv>`


Plots
*****



Dense sim plots
===============



.. thumbnail:: images/gen_dense/000001.svg
    :width: 200px


.. thumbnail:: images/gen_dense/000002.svg
    :width: 200px


.. thumbnail:: images/gen_dense/000003.svg
    :width: 200px


Alternatively see :ref:`blq_pk_dense_sim_plots`